| Museum | Location | County |
| 1827 Log Courthouse | Independence | Jackson |
| 1859 Jail, Marshal's Home & Museum | Independence | Jackson |
| Adair County Historical Society Museum | Kirksville | Adair |
| Adamson Cabin | Mt. Vernon | Lawrence |
| Agency Ford Museum | Agency | Buchanan |
| Air and Military Museum of the Ozarks | Springfield | Greene |
| Albrecht-Kemper Museum of Art | Saint Joseph | Buchanan |
| American Jazz Museum | Kansas City | Jackson |
| American Royal Museum | Kansas City | Jackson |
| Amoureux House | Ste. Genevieve | Ste. Genevieve |
| Andrew County Museum & Historical Society | Savannah | Andrew |
| Anheuser Estate | Kimmswick | Jefferson |
| Arabia Steamboat Museum | Kansas City | Jackson |
| Archery Hall of Fame and Museum | Springfield | Greene |
| Arrow Rock State Historic Site | Arrow Rock | Saline |
| Ashby-Hodge Gallery of American Art | Fayette | Howard |
| Audrain County Historical Society | Mexico | Audrain |
| Auto World Museum | Fulton | Callaway |
| Barton County Historical Society Museum | Lamar | Barton |
| Bates County Museum | Butler | Bates |
| Battle of Athens State Historic Site | Revere | Clark |
| Battle of Lexington State Historic Site | Lexington | Lafayette |
| Belger Arts Center | Kansas City | Jackson |
| Belton, Grandview and Kansas City Railroad | Belton | Cass |
| Ben Ferrel Museum | Platte City | Platte |
| Benton County Museum | Warsaw | Benton |
| Big River Train Town | Hannibal | Marion |
| Bingham-Waggoner Estate | Independence | Jackson |
| Black Archives Museum | Saint Joseph | Buchanan |
| Bollinger County Museum of Natural History | Marble Hill | Bollinger |
| Bollinger Mill State Historic Site | Burfordville | Cape Girardeau |
| Bonebrake Center of Nature and History | Salem | Dent |
| Bonnell Museum | Weston | Platte |
| Bonniebrook Gallery, Museum, and Homestead | Walnut Shade | Taney |
| Bootheel Youth Museum | Malden | Dunklin |
| Bothwell Lodge State Historic Site | Sedalia | Pettis |
| Branson Dinosaur Museum | Branson | Taney |
| Branson Military Museum | Branson | Taney |
| Bruce R. Watkins Cultural Heritage Center | Kansas City | Jackson |
| Burgess-How House | Kimmswick | Jefferson |
| Bushwacker Jail Museum | Nevada | Vernon |
| Bushwacker Museum | Nevada | Vernon |
| Calaboose | Springfield | Greene |
| Calico Cupboard Toy Sewing Machine Museum | Mountain View | Howell |
| Camden County Museum | Linn Creek | Camden |
| Cameron Depot Museum | Cameron | Linn |
| Campbell House Museum | St. Louis | St. Louis |
| Cape River Heritage Museum | Cape Girardeau | Cape Girardeau |
| Carondelet Historic Center | St. Louis | St. Louis |
| Cathedral Basilica of Saint Louis | St. Louis | St. Louis |
| Center of Creative Arts (COCA) | St. Louis | St. Louis |
| Centralia Historical Society Museum | Centralia | Boone |
| Chaffee Historical Society Museum | Chaffee | Scott |
| Champ Clark House | Bowling Green | Pike |
| Chariton County Museum | Salisbury | Chariton |
| Chatillon-DeMenil House | St. Louis | St. Louis |
| Children's Peace Pavilion | Independence | Jackson |
| Christian County Museum | Ozark | Christian |
| City Museum | St. Louis | St. Louis |
| Clay County Historical Society Museum | Liberty | Clay |
| Coal Miners Museum | Novinger | Adair |
| Cole Camp Museum | Cole Camp | Benton |
| Cole County Historical Society Museum | Jefferson City | Cole |
| College Basketball Experience | Kansas City | Jackson |
| Columbia College Galleries | Columbia | Boone |
| Commemorative Air Force Missouri Wing Museum | St. Charles | St. Charles |
| Community of Christ Museum | Independence | Jackson |
| Concordia Area Museum | Concordia | Lafayette |
| Concordia Historical Institute | Clayton | St. Louis |
| Contemporary Art Museum St. Louis | St. Louis | St. Louis |
| Craft Studio | Columbia | Boone |
| Crane's Museum & Shoppes | Williamsburg | Callaway |
| Crawford County Historical Museum | Cuba | Crawford |
| Crisp Museum | Cape Girardeau | Cape Girardeau |
| Current River Heritage Museum | Doniphan | Ripley |
| Dade County Historical Society Museum | Greenfield | Dade |
| Dallas County Museum | Buffalo | Dallas |
| Daniel Boone Home & Heritage Center | Defiance | St. Charles |
| Daum Museum of Contemporary Art | Sedalia | Pettis |
| DeKalb County Historical Society Museum | Maysville | DeKalb |
| Dent County Museum | Salem | Dent |
| Deutschheim State Historic Site | Hermann | Gasconade |
| Dexter Welcome Center Depot/Museum | Dexter | Stoddard |
| Dillard Mill State Historic Site | Davisville | Crawford |
| Dillingham-Lewis Museum | Blue Springs | Jackson |
| Discovery Center of Springfield | Springfield | Greene |
| Doc's Museum | Jamesport | Daviess |
| Doling Museum | Springfield | Greene |
| Douglas County Museum | Ava | Douglas |
| Dunklin County Museum | Kennett | Dunklin |
| Ed Clark Museum of Missouri Geology | Rolla | Phelps |
| Edna Cuddy Memorial House | Bethany | Harrison |
| Elgin Cottrell House | Clarksville | Pike |
| Elizabeth Rozier Gallery | Jefferson City | Cole |
| Ellsinore Pioneer Museum | Ellsinore | Carter |
| Enns Entomology Museum | Columbia | Boone |
| Epps-Houts Museum | Poplar Bluff | Butler |
| Eugene Field House & St. Louis Toy Museum | St. Louis | St. Louis |
| Excelsior Springs Museum | Excelsior Springs | Clay |
| Faust Village | Chesterfield | St. Louis |
| Felix Vallé House State Historic Site | Ste. Genevieve | Ste. Genevieve |
| Fenton Historical Museum | Fenton | St. Louis |
| First Missouri State Capitol State Historic Site | St. Charles | St. Charles |
| Flower Pentecostal Heritage Center Museum | Springfield | Greene |
| Fort Davidson State Historic Site | Pilot Knob | Iron |
| Fort Osage National Historic Landmark | Sibley | Jackson |
| Frank Lloyd Wright House in Ebsworth Park | Kirkwood | St. Louis |
| Frenchtown Heritage Museum | St. Charles | St. Charles |
| Frisco Depot Museum | Crocker | Pulaski |
| Gallery 210 | St. Louis | St. Louis |
| Gasconade County Historical Society Museum | Owensville | Gasconade |
| Gen. John J. Pershing Boyhood Home State Historic Site | Laclede | Linn |
| General Daniel Bissell House | St. Louis | St. Louis |
| George Caleb Bingham Gallery | Columbia | Boone |
| George Washington Carver National Monument | Diamond | Newton |
| Glenn House | Cape Girardeau | Cape Girardeau |
| Glore Psychiatric Museum | Saint Joseph | Buchanan |
| Golden Missouri Pioneer Museum | Golden | Barry |
| Granby Mining Museum | Granby | Newton |
| Grand River Historical Society Museum | Chillicothe | Livingston |
| Grandview Depot Museum | Grandview | Jackson |
| Gray/Campbell Farmstead | Springfield | Greene |
| Greenlease Art Gallery | Kansas City | Jackson |
| Grundy County Museum | Trenton | Grundy |
| Hain House | Boonville | Cooper |
| Hallmark Visitors Center | Kansas City | Jackson |
| Hannibal History Museum | Hannibal | Marion |
| Harlin Museum | West Plains | Howell |
| Harold Bell Wright Museum | Pierce City | Lawrence |
| Harris-Kearney House | Kansas City | Jackson |
| Harry S Truman Birthplace State Historic Site | Lamar | Barton |
| Harry S Truman Office and Courtroom | Independence | Jackson |
| Harry S. Truman National Historic Site | Grandview | Jackson |
| Harry S. Truman National Historic Site | Independence | Jackson |
| Harry S. Truman Presidential Library and Museum | Independence | Jackson |
| Harry S. Truman Regional Visitor Center | Warsaw | Benton |
| Haviland Museum | St. Charles | St. Charles |
| Hawken House | Webster Groves | St. Louis |
| Henry County Museum | Clinton | Henry |
| Hermann Fire Company Museum | Hermann | Gasconade |
| Hickory County Museum | Hermitage | Hickory |
| Higgerson School Historic Site | New Madrid | New Madrid |
| Historic Aircraft Restoration Museum | Maryland Heights | St. Louis |
| Historic Bethel German Colony | Bethel | Shelby |
| Historic Hanley House | Clayton | St. Louis |
| Historical Society of Lee's Summit Museum | Lee's Summit | Jackson |
| History Museum on the Square | Springfield | Greene |
| Hollywood Wax Museum | Branson | Taney |
| Holocaust Museum & Learning Center | Creve Coeur | St. Louis |
| Hulston Mill Park | Greenfield | Dade |
| Hunter-Dawson State Historic Site | New Madrid | New Madrid |
| International Photography Hall of Fame and Museum | St. Louis | St. Louis |
| Iron County Historical Society Museum | Arcadia | Iron |
| J.C. Penney Museum | Hamilton | Caldwell |
| James Farm | Kearney | Clay |
| Jefferson Barracks Museums | Lemay | St. Louis |
| Jefferson Landing State Historic Site | Jefferson City | Cole |
| Jefferson National Expansion Memorial | St. Louis | St. Louis |
| Jesse James Home Museum | Saint Joseph | Buchanan |
| Jim's Journey | Hannibal | Marion |
| John B Mahaffey Museum Complex | Fort Leonard Wood | Pulaski |
| John Colter Museum and Visitors Center | New Haven | Franklin |
| John Wornall House Museum | Kansas City | Jackson |
| Johnson County Historic Complex | Warrensburg | Johnson |
| Joplin Museum Complex | Joplin | Jasper |
| Kansas City Garment District Museum | Kansas City | Jackson |
| Kansas City Irish Center | Kansas City | Jackson |
| Kansas City Museum | Kansas City | Jackson |
| Kansas Fire Brigade Museum | Kansas City | Jackson |
| Kemp Auto Museum | Chesterfield | St. Louis |
| Kemper Museum of Contemporary Art | Kansas City | Jackson |
| Kimmswick Historical Society Museum | Kimmswick | Jefferson |
| Kingdom of Callaway Historical Society Museum | Fulton | Callaway |
| La Maison de Guibourd | Ste. Genevieve | Ste. Genevieve |
| Laclede County Historical Society Museum | Lebanon | Laclede |
| Laumeier Sculpture Park | St. Louis | St. Louis |
| Laura Ingalls Wilder Historic Home and Museum | Mansfield | Wright |
| Lawrence County Historical Society Museum | Mount Vernon | Lawrence |
| Leila's Hair Museum | Independence | Jackson |
| Lemp Neighborhood Arts Center | St. Louis | St. Louis |
| Lewis & Clark Boat House and Nature Center | St. Charles | St. Charles |
| Lewis County Historical Society Library & Museum | Canton | Lewis |
| Lexington Historical Museum | Lexington | Lafayette |
| Liberty Jail | Liberty | Clay |
| Lincoln County Jail Museum | Troy | Lincoln |
| Lone Jack Battlefield Museum | Lone Jack | Jackson |
| Louis Bolduc House | Ste. Genevieve | Ste. Genevieve |
| Louisiana Area Historical Museum | Louisiana | Pike |
| Lutheran Heritage Center & Museum | Altenburg | Perry |
| MAAPS Military Museum | Malden | Dunklin |
| Malden Historical Museum | Malden | Dunklin |
| Maplewood | Columbia | Boone |
| Margaret Harwell Art Museum | Poplar Bluff | Butler |
| Mark Twain Birthplace State Historic Site | Florida | Monroe |
| Mark Twain Boyhood Home & Museum | Hannibal | Marion |
| Marshall Welcome Center and Jim the Wonder Dog Museum | Marshall | Saline |
| Mastodon State Historic Site | Imperial | Jefferson |
| May Gallery | Webster Groves | St. Louis |
| McClure Archives and University Museum | Warrensburg | Johnson |
| McDonald County Historical Museum | Pineville | McDonald |
| Mid-Missouri Museum of Independent Telephone Pioneers | Blackwater | Cooper |
| Mildred Lane Kemper Art Museum | St. Louis | St. Louis |
| Miller County Museum | Tuscumbia | Miller |
| Miniature Museum of Greater St. Louis | St. Louis | St. Louis |
| Mississippi County Historical Museum | East Prairie | Mississippi |
| Missouri Children's Museum | Columbia | Boone |
| Missouri Civil War Museum | Lemay | St. Louis |
| Missouri Farm Bureau Log Home | Jefferson City | Cole |
| Missouri Governor's Mansion | Jefferson City | Cole |
| Missouri History Museum | St. Louis | St. Louis |
| Missouri Mines State Historic Site | Park Hills | St. Francois |
| Missouri Sports Hall of Fame | Springfield | Greene |
| Missouri State Capitol | Jefferson City | Cole |
| Missouri State Museum | Jefferson City | Cole |
| Missouri State Penitentiary | Jefferson City | Cole |
| Missouri Town 1855 | Lee's Summit | Jackson |
| Missouri Veterinary Medical Foundation Museum | Jefferson City | Cole |
| Molly Brown Birthplace & Museum | Hannibal | Marion |
| Money Museum | Kansas City | Jackson |
| Monroe County Museum | Paris | Monroe |
| Montauk State Park | Salem | Dent |
| Moore Home | Charleston | Mississippi |
| Morgan County Historical Society Museum | Versailles | Morgan |
| Mormon Visitors Center | Independence | Jackson |
| Museum at the German School | Hermann | Gasconade |
| Museum of Anthropology | Columbia | Boone |
| Museum of Art and Archaeology | Columbia | Boone |
| Museum of Contemporary Religious Art | St. Louis | St. Louis |
| Museum of Missouri Military History | Jefferson City | Cole |
| Museum of the Dog | St. Louis | St. Louis |
| Museum of Transportation | Kirkwood | St. Louis |
| Nathan Boone Homestead State Historic Site | Ash Grove | Greene |
| National Airline History Museum | Kansas City | Clay |
| National BB Gun Museum | Branson | Taney |
| National Churchill Museum | Fulton | Callaway |
| National Frontier Trails Museum | Independence | Jackson |
| National Military Heritage Museum | Saint Joseph | Buchanan |
| National Museum of Toys and Miniatures | Kansas City | Jackson |
| National Silk Art Museum | Weston | Platte |
| National World War I Museum and Memorial | Kansas City | Jackson |
| Negro Leagues Baseball Museum | Kansas City | Jackson |
| Nelson-Atkins Museum of Art | Kansas City | Jackson |
| New Madrid Historical Museum | New Madrid | New Madrid |
| Newton County Historical Park | Neosho | Newton |
| Nicholas Beazley Aviation Museum | Marshall | Saline |
| Nodaway County Historical Society Museum | Maryville | Nodaway |
| NRA National Sporting Arms Museum | Springfield | Greene |
| Old Cooper County Jail & Hanging Barn | Boonville | Cooper |
| Old Courthouse | St. Louis | St. Louis |
| Old Stagecoach Stop | Waynesville | Pulaski |
| Ozark Natural & Cultural Resource Center | Salem | Dent |
| Patee House | Saint Joseph | Buchanan |
| Phelps County Museum | Rolla | Phelps |
| Pioneer Heritage Homestead | Doniphan | Ripley |
| Pioneer Spring Cabin | Independence | Jackson |
| Pleasant Hill Historical Society Museum | Pleasant Hill | Cass |
| Polk County Museum | Bolivar | Polk |
| Pony Express Museum | Saint Joseph | Buchanan |
| Poplar Bluff Historical Museum | Poplar Bluff | Butler |
| Poplar Bluff Railroad Museum | Poplar Bluff | Butler |
| Poplar Heights Farm | Butler | Bates |
| Powers Museum | Carthage | Jasper |
| Pulaski County Courthouse Museum | Waynesville | Pulaski |
| Pulitzer Arts Foundation | St. Louis | St. Louis |
| Puppetry Arts Institute | Independence | Jackson |
| Railroad Historical Museum | Springfield | Greene |
| Ralph Foster Museum | Point Lookout | Taney |
| Randolph County Historical Museum | Moberly | Randolph |
| Ray County Museum | Richmond | Ray |
| Raytown Historical Society Museum | Raytown | Jackson |
| Red House Interpretive Center | Cape Girardeau | Cape Girardeau |
| Remember When Toy Museum & Historic Village | Canton | Lewis |
| Remington Nature Center | Saint Joseph | Buchanan |
| Reynolds County Genealogy and Historical Society Museum | Ellington | Reynolds |
| Ripley's Believe It or Not! Museum | Branson | Taney |
| Riverbluff Cave | Springfield | Greene |
| Robidoux Row Museum | Saint Joseph | Buchanan |
| Rocheport Historical Museum | Rocheport | Boone |
| Rockcliffe Mansion | Hannibal | Marion |
| Route 66 Museum | Lebanon | Laclede |
| Route 66 State Park Visitors Center | Eureka | St. Louis |
| Ruth W. Towne Museum | Kirksville | Adair |
| Saint Louis Art Museum | St. Louis | St. Louis |
| Saint Louis University Museum of Art | St. Louis | St. Louis |
| Samuel Cupples House | St. Louis | St. Louis |
| Saxon Lutheran Memorial | Frohna | Perry |
| Science City at Union Station | Kansas City | Jackson |
| Scott Joplin House State Historic Site | St. Louis | St. Louis |
| Shoal Creek Living History Museum | Kansas City | Clay |
| Softball Museum | Springfield | Greene |
| Soldiers' Memorial | St. Louis | St. Louis |
| Springfield Art Museum | Springfield | Greene |
| St. Charles County Historical Society Museum | St. Charles | St. Charles |
| St. Clair Historical Museum | St. Clair | Franklin |
| St. Joseph Fire Museum | Saint Joseph | Buchanan |
| St. Joseph Museum | Saint Joseph | Buchanan |
| St. Louis Cardinals Hall of Fame Museum | St. Louis | St. Louis |
| St. Louis Mercantile Library | St. Louis | St. Louis |
| St. Louis Science Center | St. Louis | St. Louis |
| St. Louis Soccer Hall of Fame | St. Louis | St. Louis |
| St. Louis Union Station Memories Museum | St. Louis | St. Louis |
| St. Robert City Museum | St. Robert | Pulaski |
| Stars and Stripes Museum | Bloomfield | Stoddard |
| State Historical Society of Missouri | Columbia | Boone |
| Ste. Genevieve Museum | Ste. Genevieve | Ste. Genevieve |
| Stephens College Historic Costume Gallery | Columbia | Boone |
| Stephens Museum | Fayette | Howard |
| Sterling Price Museum | Keytesville | Chariton |
| Still National Osteopathic Museum | Kirksville | Adair |
| Taille de Noyer | Florissant | St. Louis |
| Texas County Historical & Military Museum | Houston | Texas |
| The Griot Museum of Black History | St. Louis | St. Louis |
| The Magic House, St. Louis Children's Museum | St. Louis | St. Louis |
| The Sheldon | St. Louis | St. Louis |
| The Space Center | Bonne Terre | St. Francois |
| Thomas Hart Benton Home and Studio State Historic Site | Kansas City | Jackson |
| Thomas Sappington House | Crestwood | St. Louis |
| Thornhill | Chesterfield | St. Louis |
| Titanic World's Largest Museum Attraction | Branson | Taney |
| Townley House Museum | Chamois | Osage |
| Trailside Center | Kansas City | Jackson |
| Truman State University Art Gallery | Kirksville | Adair |
| UCM Gallery of Art and Design | Warrensburg | Johnson |
| Ulysses S. Grant National Historic Site | Grantwood Village | St. Louis |
| United Federation of Doll Clubs Museum | Kansas City | Jackson |
| Vaile Mansion | Independence | Jackson |
| Veterans Memorial Museum | Branson | Taney |
| Village at Boone Junction | Columbia | Boone |
| Walt Disney Hometown Museum | Marceline | Linn |
| Walters-Boone County Museum | Columbia | Boone |
| Warren E. Hearnes Museum | Charleston | Mississippi |
| Washington Firehouse Museum | Washington | Franklin |
| Washington Museum | Washington | Franklin |
| Watkins Woolen Mill State Park and State Historic Site | Lawson | Clay |
| Weldon Spring Site Interpretive Center | St. Charles | St. Charles |
| Weston Historical Museum | Weston | Platte |
| Westphalia Historical Society Museum | Westphalia | Osage |
| Wilson's Creek National Battlefield | Republic | Greene |
| Wonders of Wildlife Museum & Aquarium | Springfield | Greene |
| World Chess Hall of Fame | St. Louis | St. Louis |
| World's Largest Toy Museum | Branson | Taney |
| Wyeth-Tootle Mansion | Saint Joseph | Buchanan |
| Zewicki House Museum | Linn | Osage |